Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN05421504_101967 | Not Available | Positive | 1088913 - 1089572 | 23187.2 |
| putative abc transport system permease protein | SAMN05421504_101968 | Not Available | Positive | 1089569 - 1090738 | 39973.3 |
| hypothetical protein | SAMN05421504_101969 | Not Available | Positive | 1090752 - 1091288 | 19520.7 |
| hypothetical protein | SAMN05421504_101970 | Not Available | Negative | 1091338 - 1092513 | 41640.7 |
| putative flavoprotein involved in k+ transport | SAMN05421504_101971 | Not Available | Positive | 1092662 - 1094479 | 67474.2 |
| predicted lipoprotein with conserved yx(fwy)xxd motif | SAMN05421504_101972 | Not Available | Negative | 1095084 - 1096025 | 32427.3 |
| protein of unknown function | SAMN05421504_101973 | Not Available | Negative | 1096073 - 1097536 | 52043.8 |
| putative zinc-finger | SAMN05421504_101974 | Not Available | Negative | 1097817 - 1098560 | 25820.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_101975 | Not Available | Negative | 1098567 - 1099127 | 20913.8 |
| secreted repeat of unknown function | SAMN05421504_101976 | Not Available | Positive | 1099361 - 1099915 | 19239.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
