Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMN05421504_101907 | Not Available | Negative | 1025169 - 1025726 | 21077.3 |
| hypothetical protein | SAMN05421504_101908 | Not Available | Positive | 1025880 - 1026872 | 35391.5 |
| hypothetical protein | SAMN05421504_101909 | Not Available | Positive | 1026915 - 1027229 | 10671.0 |
| protein of unknown function | SAMN05421504_101910 | Not Available | Positive | 1027308 - 1027682 | 12784.8 |
| whg domain-containing protein | SAMN05421504_101911 | Not Available | Positive | 1027675 - 1028166 | 17401.2 |
| uncharacterized hhh-gpd family protein | SAMN05421504_101912 | Not Available | Negative | 1028177 - 1028752 | 20697.1 |
| tigr03086 family protein | SAMN05421504_101913 | Not Available | Positive | 1028886 - 1029461 | 19990.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421504_101914 | Not Available | Negative | 1029468 - 1031402 | 69036.5 |
| hypothetical protein | SAMN05421504_101915 | Not Available | Positive | 1031604 - 1032545 | 33205.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421504_101916 | Not Available | Positive | 1033090 - 1033758 | 24878.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
