Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421504_1224 | Not Available | Positive | 9383066 - 9383359 | 10742.5 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN05421504_1225 | Not Available | Positive | 9383356 - 9383901 | 18469.5 |
| ornithine cyclodeaminase | SAMN05421504_1226 | Not Available | Positive | 9383898 - 9384905 | 36676.9 |
| histidine ammonia-lyase | SAMN05421504_1227 | Not Available | Positive | 9384902 - 9386230 | 46815.3 |
| osmoprotectant transport system permease protein | SAMN05421504_1228 | Not Available | Negative | 9386198 - 9386914 | 25416.4 |
| osmoprotectant transport system permease protein | SAMN05421504_1229 | Not Available | Negative | 9386911 - 9387600 | 24895.0 |
| osmoprotectant transport system substrate-binding protein | SAMN05421504_12210 | Not Available | Positive | 9387734 - 9388654 | 32520.1 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05421504_12211 | Not Available | Negative | 9388697 - 9391363 | 94780.6 |
| nitt/taut family transport system atp-binding protein | SAMN05421504_12212 | Not Available | Negative | 9391360 - 9392070 | 25312.7 |
| nitt/taut family transport system permease protein | SAMN05421504_12213 | Not Available | Negative | 9392067 - 9392897 | 30132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
