Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421504_12019 | Not Available | Negative | 9355566 - 9357170 | 58116.7 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | SAMN05421504_12020 | Not Available | Negative | 9357193 - 9358161 | 34135.7 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SAMN05421504_12021 | Not Available | Negative | 9358158 - 9358778 | 21974.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05421504_1211 | Not Available | Negative | 9358914 - 9359804 | 31437.0 |
| mfs transporter, ynfm family, putative membrane transport protein | SAMN05421504_1212 | Not Available | Positive | 9359877 - 9361130 | 41311.9 |
| predicted o-methyltransferase yrrm | SAMN05421504_1213 | Not Available | Negative | 9360971 - 9361588 | 21670.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_1214 | Not Available | Positive | 9361827 - 9362450 | 23502.5 |
| hypothetical protein | SAMN05421504_1215 | Not Available | Positive | 9362447 - 9363103 | 21841.1 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05421504_1216 | Not Available | Positive | 9363201 - 9364703 | 50645.1 |
| sec-independent protein translocase protein tatb | SAMN05421504_1217 | Not Available | Positive | 9364752 - 9365168 | 14963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
