Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN05421504_1178 | Not Available | Negative | 9219789 - 9220331 | 20310.7 |
| hypothetical protein | SAMN05421504_1179 | Not Available | Positive | 9220698 - 9221681 | 32255.5 |
| hypothetical protein | SAMN05421504_11710 | Not Available | Negative | 9222108 - 9223706 | 57994.4 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05421504_11711 | Not Available | Negative | 9223870 - 9225321 | 51238.6 |
| uncharacterized membrane protein ycze | SAMN05421504_11712 | Not Available | Positive | 9225374 - 9226003 | 21909.3 |
| clp amino terminal domain-containing protein, pathogenicity island component | SAMN05421504_11713 | Not Available | Negative | 9226055 - 9226597 | 19434.5 |
| sigma-70, region 4 | SAMN05421504_11714 | Not Available | Negative | 9226597 - 9226806 | 7716.24 |
| protein phosphatase 2c | SAMN05421504_11715 | Not Available | Positive | 9226872 - 9227618 | 27245.1 |
| protein of unknown function | SAMN05421504_11716 | Not Available | Positive | 9227671 - 9228444 | 27242.5 |
| d-cysteine desulfhydrase | SAMN05421504_11717 | Not Available | Negative | 9228262 - 9229260 | 34911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
