Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421504_116100 | Not Available | Negative | 9212846 - 9213229 | 13439.7 |
| helix-turn-helix domain-containing protein | SAMN05421504_116101 | Not Available | Negative | 9213233 - 9214045 | 29454.4 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SAMN05421504_116102 | Not Available | Negative | 9214156 - 9214831 | 23657.5 |
| integrase core domain-containing protein | SAMN05421504_1171 | Not Available | Positive | 9214832 - 9215148 | 11669.8 |
| broad-specificity nmp kinase | SAMN05421504_1172 | Not Available | Negative | 9215209 - 9215832 | 23470.1 |
| hypothetical protein | SAMN05421504_1173 | Not Available | Negative | 9215837 - 9216175 | 12282.1 |
| hypothetical protein | SAMN05421504_1174 | Not Available | Negative | 9216213 - 9216596 | 13863.2 |
| cgnr zinc finger domain-containing protein | SAMN05421504_1175 | Not Available | Positive | 9216681 - 9217172 | 18040.2 |
| uncharacterized membrane-anchored protein yjin, duf445 family | SAMN05421504_1176 | Not Available | Negative | 9217265 - 9218593 | 48887.0 |
| n-succinyldiaminopimelate aminotransferase | SAMN05421504_1177 | Not Available | Positive | 9218623 - 9219792 | 42133.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
