Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421504_11610 | Not Available | Negative | 9109935 - 9111104 | 41303.9 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN05421504_11611 | Not Available | Negative | 9111082 - 9112092 | 36516.6 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05421504_11612 | Not Available | Negative | 9112089 - 9113186 | 39096.1 |
| dna-binding transcriptional regulator, lrp family | SAMN05421504_11613 | Not Available | Positive | 9113299 - 9113781 | 17741.2 |
| ornithine cyclodeaminase | SAMN05421504_11614 | Not Available | Positive | 9113792 - 9114688 | 30230.1 |
| hypothetical protein | SAMN05421504_11615 | Not Available | Negative | 9114713 - 9115000 | 10634.8 |
| cupin domain protein | SAMN05421504_11616 | Not Available | Positive | 9115101 - 9115532 | 14763.6 |
| hypothetical protein | SAMN05421504_11617 | Not Available | Negative | 9115533 - 9115955 | 15631.6 |
| aldehyde dehydrogenase family protein | SAMN05421504_11618 | Not Available | Negative | 9115977 - 9116708 | 25849.7 |
| phenazine biosynthesis protein phzf family | SAMN05421504_11619 | Not Available | Negative | 9117147 - 9118016 | 30797.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
