Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421504_115117 | Not Available | Negative | 9082354 - 9082962 | 21136.3 |
| septum formation | SAMN05421504_115118 | Not Available | Positive | 9083118 - 9084044 | 32130.3 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN05421504_115119 | Not Available | Positive | 9084049 - 9084399 | 13289.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_115120 | Not Available | Positive | 9084533 - 9085474 | 34271.0 |
| predicted arabinose efflux permease, mfs family | SAMN05421504_115121 | Not Available | Positive | 9085574 - 9086815 | 42242.4 |
| hypothetical protein | SAMN05421504_115122 | Not Available | Positive | 9086894 - 9087325 | 14881.8 |
| protein of unknown function | SAMN05421504_115123 | Not Available | Negative | 9087322 - 9087957 | 21115.9 |
| probable phosphoglycerate mutase | SAMN05421504_115124 | Not Available | Negative | 9088087 - 9088707 | 21645.7 |
| prephenate dehydratase | SAMN05421504_115125 | Not Available | Negative | 9088704 - 9089615 | 32003.8 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05421504_115126 | Not Available | Positive | 9089736 - 9090341 | 21397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
