Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | SAMN05421504_11488 | Not Available | Negative | 8912581 - 8913378 | 27419.1 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421504_11489 | Not Available | Negative | 8913371 - 8914342 | 36077.5 |
| protein of unknown function | SAMN05421504_11490 | Not Available | Positive | 8914384 - 8914800 | 14544.9 |
| winged helix dna-binding domain-containing protein | SAMN05421504_11491 | Not Available | Positive | 8914849 - 8915970 | 40773.0 |
| subtilase family protein | SAMN05421504_11492 | Not Available | Negative | 8916246 - 8917382 | 38475.2 |
| hypothetical protein | SAMN05421504_11493 | Not Available | Negative | 8917397 - 8919553 | 76579.0 |
| hypothetical protein | SAMN05421504_11494 | Not Available | Negative | 8919661 - 8921751 | 73547.3 |
| sirohydrochlorin ferrochelatase | SAMN05421504_11495 | Not Available | Negative | 8921839 - 8922501 | 22749.4 |
| uroporphyrinogen-iii synthase | SAMN05421504_11496 | Not Available | Negative | 8922498 - 8923607 | 38670.9 |
| nitrite reductase (nadh) small subunit | SAMN05421504_11497 | Not Available | Negative | 8923604 - 8923945 | 11590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
