Amycolatopsis xylanica strain CPCC 202699

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis xylanica strain CPCC 202699 is a Gram-positive, aerobic bacterium characterized by its non-motile nature. It possesses a single replicon and is capable of sporulation, allowing it to form spores under certain conditions. This strain operates optimally at a temperature of 29°C and falls within the mesophilic temperature range. The presence of flagella has been noted, which is a common feature in some bacterial species, although this strain is non-motile. The ability to form spores is significant for the survival of Amycolatopsis xylanica in fluctuating environmental conditions, allowing it to withstand stressors that might otherwise threaten its viability. The strain’s aerobic requirement suggests a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its characteristics, Amycolatopsis xylanica strain CPCC 202699 may play a role in decomposing organic matter in aerobic environments, contributing to nutrient cycling. Its spore-forming ability could enhance its ecological resilience and facilitate its dissemination in various habitats, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis xylanica
Strainstrain CPCC 202699

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis xylanica strain CPCC 202699 genome assembly, contig:

Gene Summary

Adenine Count

1469318 bp

Thymine Count

1456495 bp

Guanine Count

3232640 bp

Cytosine Count

3247627 bp

Genome Length

9406090 bp

Protein-coding Genes

8489 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted zn-dependent peptidaseSAMN05421504_11468Not AvailableNegative8886466 - 888784848846.9
predicted zn-dependent peptidaseSAMN05421504_11469Not AvailableNegative8887851 - 888913146718.0
predicted membrane proteinSAMN05421504_11470Not AvailableNegative8889152 - 889073256800.2
predicted membrane proteinSAMN05421504_11471Not AvailableNegative8890729 - 889248661790.7
hypothetical proteinSAMN05421504_11472Not AvailablePositive8892812 - 889400842080.2
uncharacterized membrane protein yckc, rdd familySAMN05421504_11473Not AvailableNegative8894058 - 889506536093.1
uncharacterized membrane protein spoiim, required for sporulationSAMN05421504_11474Not AvailablePositive8895188 - 889619535746.2
ricin-type beta-trefoil lectin domain-containing proteinSAMN05421504_11475Not AvailableNegative8896231 - 889704927782.2
uncharacterized conserved protein, duf58 family, contains vwf domainSAMN05421504_11476Not AvailableNegative8897126 - 889841846395.3
moxr-like atpaseSAMN05421504_11477Not AvailableNegative8898418 - 889938934512.6

Displaying genes 8061 – 8070 of 8572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.