Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | SAMN05421504_113114 | Not Available | Negative | 8726075 - 8727277 | 42064.3 |
| hypothetical protein | SAMN05421504_113115 | Not Available | Negative | 8727421 - 8728788 | 49739.4 |
| glycosyl hydrolases family 2 | SAMN05421504_113116 | Not Available | Positive | 8729017 - 8731824 | 103443.0 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05421504_113117 | Not Available | Negative | 8731886 - 8732629 | 27663.6 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421504_113118 | Not Available | Negative | 8732701 - 8734125 | 50608.4 |
| neamine transaminase / 2'-deamino-2'-hydroxyneamine transaminase / neomycin c transaminase | SAMN05421504_113119 | Not Available | Negative | 8734144 - 8735397 | 44698.9 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05421504_113120 | Not Available | Positive | 8735644 - 8737155 | 55781.9 |
| hypothetical protein | SAMN05421504_113121 | Not Available | Negative | 8737146 - 8738831 | 61465.4 |
| abc-2 type transport system permease protein | SAMN05421504_113122 | Not Available | Negative | 8738831 - 8739631 | 29306.5 |
| abc-2 type transport system permease protein | SAMN05421504_113123 | Not Available | Negative | 8739634 - 8740458 | 30113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
