Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421504_11334 | Not Available | Negative | 8644108 - 8645004 | 31678.4 |
| iron-containing redox enzyme | SAMN05421504_11335 | Not Available | Positive | 8645148 - 8646155 | 36632.4 |
| zn-finger domain of cdgsh type-containing protein | SAMN05421504_11336 | Not Available | Negative | 8646161 - 8646385 | 7964.52 |
| hypothetical protein | SAMN05421504_11337 | Not Available | Positive | 8646634 - 8647764 | 41390.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421504_11338 | Not Available | Positive | 8647799 - 8648872 | 37951.3 |
| phytoene dehydrogenase-related protein | SAMN05421504_11339 | Not Available | Positive | 8648869 - 8650464 | 55873.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421504_11340 | Not Available | Negative | 8650461 - 8650910 | 16145.5 |
| glycine/d-amino acid oxidase | SAMN05421504_11341 | Not Available | Positive | 8650983 - 8652476 | 52788.6 |
| formate-dependent nitrite reductase, membrane component nrfd | SAMN05421504_11342 | Not Available | Negative | 8652486 - 8653421 | 32254.4 |
| formate dehydrogenase iron-sulfur subunit | SAMN05421504_11343 | Not Available | Negative | 8653418 - 8654188 | 27487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
