Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s6--l-glutamate ligase | SAMN05421504_11324 | Not Available | Positive | 8632402 - 8633334 | 34063.5 |
| adenylylsulfate kinase | SAMN05421504_11325 | Not Available | Positive | 8633336 - 8633893 | 19669.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421504_11326 | Not Available | Positive | 8634205 - 8635200 | 36575.6 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05421504_11327 | Not Available | Positive | 8635228 - 8636007 | 26906.9 |
| uncharacterized conserved protein, duf1330 family | SAMN05421504_11328 | Not Available | Positive | 8636055 - 8636351 | 10647.5 |
| predicted atpase | SAMN05421504_11329 | Not Available | Positive | 8636433 - 8639276 | 101353.0 |
| peptidase_c39 like family protein | SAMN05421504_11330 | Not Available | Positive | 8639372 - 8639881 | 18079.8 |
| repeat domain-containing protein | SAMN05421504_11331 | Not Available | Positive | 8639951 - 8641237 | 44064.9 |
| repeat domain-containing protein | SAMN05421504_11332 | Not Available | Positive | 8641250 - 8642572 | 45657.8 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN05421504_11333 | Not Available | Positive | 8642583 - 8644061 | 51764.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
