Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylisocitrate lyase, pep mutase family | SAMN05421504_11237 | Not Available | Positive | 8427471 - 8428286 | 29086.6 |
| reactive intermediate/imine deaminase | SAMN05421504_11238 | Not Available | Negative | 8428354 - 8428737 | 13321.9 |
| dna-binding transcriptional regulator, iclr family | SAMN05421504_11239 | Not Available | Negative | 8428738 - 8429499 | 27756.1 |
| 2-dehydro-3-deoxygluconokinase | SAMN05421504_11240 | Not Available | Negative | 8429496 - 8430452 | 33152.4 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN05421504_11241 | Not Available | Positive | 8430566 - 8431867 | 46499.2 |
| n-acyl-d-amino-acid deacylase | SAMN05421504_11242 | Not Available | Positive | 8431867 - 8433465 | 56961.0 |
| gluconate:h+ symporter, gntp family | SAMN05421504_11243 | Not Available | Positive | 8433459 - 8434847 | 47269.4 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN05421504_11244 | Not Available | Positive | 8434883 - 8436013 | 39248.4 |
| n,n'-diacetylchitobiose transport system substrate-binding protein | SAMN05421504_11245 | Not Available | Positive | 8436028 - 8437311 | 44874.5 |
| n,n'-diacetylchitobiose transport system permease protein | SAMN05421504_11246 | Not Available | Positive | 8437312 - 8438268 | 34494.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
