Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421504_101738 | Not Available | Negative | 847609 - 848082 | 16905.1 |
| 4-hydroxyphenylacetate 3-monooxygenase | SAMN05421504_101739 | Not Available | Negative | 848086 - 849615 | 56556.1 |
| uncharacterized nad(p)/fad-binding protein ydhs | SAMN05421504_101740 | Not Available | Negative | 849629 - 851164 | 54970.0 |
| aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase | SAMN05421504_101741 | Not Available | Positive | 851453 - 852913 | 52012.6 |
| 2-keto-4-pentenoate hydratase | SAMN05421504_101742 | Not Available | Positive | 852900 - 853469 | 18676.5 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN05421504_101743 | Not Available | Positive | 853466 - 854263 | 27890.4 |
| 4-oxalocrotonate tautomerase | SAMN05421504_101744 | Not Available | Positive | 854263 - 854475 | 7624.18 |
| catechol 2,3-dioxygenase | SAMN05421504_101745 | Not Available | Positive | 854472 - 855452 | 36962.6 |
| ribosomal protein s18 acetylase rimi | SAMN05421504_101746 | Not Available | Negative | 855429 - 855968 | 19397.2 |
| hypothetical protein | SAMN05421504_101747 | Not Available | Negative | 856045 - 856359 | 11366.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
