Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| streptogrisin c | SAMN05421504_111105 | Not Available | Positive | 8207770 - 8209083 | 44104.2 |
| peptidase family m1 | SAMN05421504_111106 | Not Available | Negative | 8209206 - 8210675 | 53064.1 |
| protein of unknown function | SAMN05421504_111107 | Not Available | Negative | 8210727 - 8211275 | 19893.3 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421504_111108 | Not Available | Positive | 8211339 - 8212265 | 33937.5 |
| regulatory protein, luxr family | SAMN05421504_111109 | Not Available | Negative | 8212241 - 8214946 | 96869.5 |
| catechol 2,3-dioxygenase | SAMN05421504_111110 | Not Available | Positive | 8215065 - 8215487 | 15276.8 |
| hypothetical protein | SAMN05421504_111111 | Not Available | Positive | 8215507 - 8215662 | 5938.8 |
| hnh endonuclease | SAMN05421504_111112 | Not Available | Positive | 8216157 - 8217449 | 46778.5 |
| predicted arabinose efflux permease, mfs family | SAMN05421504_111113 | Not Available | Positive | 8218690 - 8219877 | 39906.8 |
| cupin-like domain-containing protein | SAMN05421504_111114 | Not Available | Positive | 8219874 - 8220689 | 30981.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
