Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421504_110296 | Not Available | Positive | 8069663 - 8071372 | 59983.3 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421504_110297 | Not Available | Negative | 8071376 - 8072476 | 40009.9 |
| protein of unknown function | SAMN05421504_110298 | Not Available | Negative | 8072588 - 8072848 | 9691.85 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SAMN05421504_110299 | Not Available | Positive | 8072943 - 8074148 | 41880.1 |
| rip metalloprotease rsep | SAMN05421504_110300 | Not Available | Positive | 8074152 - 8075396 | 44337.4 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SAMN05421504_110301 | Not Available | Positive | 8075428 - 8076212 | 27936.7 |
| oxidase evaa | SAMN05421504_1111 | Not Available | Negative | 8076213 - 8076401 | 7348.56 |
| predicted dehydrogenase | SAMN05421504_1112 | Not Available | Negative | 8076391 - 8077407 | 36518.9 |
| l-rhodinosyltransferase/glycosyltransferase | SAMN05421504_1113 | Not Available | Negative | 8077404 - 8078666 | 46071.7 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05421504_1114 | Not Available | Negative | 8078874 - 8080445 | 54206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
