Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanine745-n1)-methyltransferase | SAMN05421504_110226 | Not Available | Negative | 7993101 - 7993793 | 24679.6 |
| ammonium transporter, amt family | SAMN05421504_110227 | Not Available | Positive | 7994117 - 7995496 | 47375.1 |
| nitrogen regulatory protein p-ii family | SAMN05421504_110228 | Not Available | Positive | 7995493 - 7995831 | 12229.8 |
| [protein-pii] uridylyltransferase | SAMN05421504_110229 | Not Available | Positive | 7995834 - 7998146 | 82265.4 |
| hypothetical protein | SAMN05421504_110230 | Not Available | Negative | 7998182 - 7999576 | 49304.9 |
| hypothetical protein | SAMN05421504_110231 | Not Available | Positive | 7999775 - 8001532 | 61700.9 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05421504_110232 | Not Available | Positive | 8001957 - 8005961 | 140016.0 |
| intein c-terminal splicing region/rhs repeat-associated core domain-containing protein | SAMN05421504_110233 | Not Available | Positive | 8006026 - 8012886 | 244369.0 |
| hypothetical protein | SAMN05421504_110234 | Not Available | Positive | 8013397 - 8013768 | 12612.0 |
| dna end-binding protein ku | SAMN05421504_110235 | Not Available | Positive | 8013805 - 8014632 | 30469.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
