Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylmercury lyase | SAMN05421504_109152 | Not Available | Positive | 7569593 - 7570258 | 24080.5 |
| geranylgeranyl diphosphate synthase, type i | SAMN05421504_109153 | Not Available | Positive | 7570320 - 7571411 | 37694.7 |
| phytoene desaturase | SAMN05421504_109154 | Not Available | Positive | 7571413 - 7572876 | 52510.0 |
| phytoene synthase | SAMN05421504_109155 | Not Available | Positive | 7572873 - 7573781 | 33393.1 |
| probable f420-dependent oxidoreductase, msmeg_2906 family | SAMN05421504_109156 | Not Available | Positive | 7573791 - 7574582 | 29054.2 |
| hypothetical protein | SAMN05421504_109157 | Not Available | Negative | 7574905 - 7575207 | 10795.1 |
| serine/threonine protein kinase | SAMN05421504_109158 | Not Available | Positive | 7575399 - 7577450 | 71373.3 |
| hypothetical protein | SAMN05421504_109159 | Not Available | Positive | 7577447 - 7577656 | 7641.09 |
| uncharacterized membrane protein yqik, contains band7/phb/spfh domain | SAMN05421504_109160 | Not Available | Positive | 7577703 - 7579217 | 53097.8 |
| hypothetical protein | SAMN05421504_109161 | Not Available | Positive | 7579274 - 7579978 | 25901.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
