Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421504_108122 | Not Available | Negative | 7132234 - 7132878 | 23708.2 |
| peptidase family m28 | SAMN05421504_108123 | Not Available | Negative | 7133004 - 7134581 | 55688.7 |
| fungalysin metallopeptidase (m36) | SAMN05421504_108124 | Not Available | Negative | 7134578 - 7136650 | 73429.0 |
| acyl-coa dehydrogenase | SAMN05421504_108125 | Not Available | Positive | 7136785 - 7137918 | 39816.4 |
| chitin-binding protein | SAMN05421504_108126 | Not Available | Positive | 7137971 - 7138738 | 28060.6 |
| wd40-like beta propeller repeat | SAMN05421504_108127 | Not Available | Negative | 7138716 - 7139975 | 43113.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_108128 | Not Available | Positive | 7140064 - 7141014 | 33854.1 |
| regulatory protein, luxr family | SAMN05421504_108129 | Not Available | Positive | 7141083 - 7141811 | 26450.9 |
| papain family cysteine protease | SAMN05421504_108130 | Not Available | Negative | 7141808 - 7143391 | 58026.7 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421504_108131 | Not Available | Negative | 7143497 - 7144432 | 33528.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
