Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421504_107385 | Not Available | Negative | 6905244 - 6907463 | 78258.8 |
| hypothetical protein | SAMN05421504_107386 | Not Available | Positive | 6907803 - 6908099 | 10531.1 |
| sugar-specific transcriptional regulator trmb | SAMN05421504_107387 | Not Available | Positive | 6908202 - 6909155 | 35124.6 |
| hypothetical protein | SAMN05421504_107388 | Not Available | Positive | 6909273 - 6909761 | 17785.4 |
| glycosyl hydrolases family 18 | SAMN05421504_107389 | Not Available | Negative | 6909818 - 6911173 | 46218.8 |
| chitinase | SAMN05421504_107390 | Not Available | Negative | 6911176 - 6912825 | 56786.6 |
| glycosyl hydrolases family 18 | SAMN05421504_107391 | Not Available | Negative | 6912836 - 6914254 | 49178.7 |
| nad(p)h-dependent fmn reductase | SAMN05421504_107392 | Not Available | Negative | 6914418 - 6915005 | 21345.1 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN05421504_107393 | Not Available | Positive | 6915117 - 6915728 | 21460.6 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN05421504_107394 | Not Available | Positive | 6915728 - 6916687 | 34444.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
