Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421504_107355 | Not Available | Negative | 6865669 - 6866943 | 44812.9 |
| hypothetical protein | SAMN05421504_107356 | Not Available | Positive | 6867060 - 6867560 | 18938.8 |
| hypothetical protein | SAMN05421504_107357 | Not Available | Positive | 6867568 - 6868506 | 34041.6 |
| hypothetical protein | SAMN05421504_107358 | Not Available | Positive | 6868664 - 6869395 | 25768.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_107359 | Not Available | Positive | 6869491 - 6870258 | 25736.1 |
| transcription termination factor rho | SAMN05421504_107360 | Not Available | Negative | 6870255 - 6871325 | 38671.6 |
| hypothetical protein | SAMN05421504_107361 | Not Available | Positive | 6871532 - 6871804 | 9680.0 |
| yidc/oxa1 family membrane protein insertase | SAMN05421504_107362 | Not Available | Positive | 6871870 - 6872592 | 26187.0 |
| hypothetical protein | SAMN05421504_107363 | Not Available | Negative | 6872589 - 6873065 | 16690.4 |
| dna-binding transcriptional activator of the sarp family | SAMN05421504_107364 | Not Available | Negative | 6873154 - 6875808 | 95673.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
