Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, fadr family | SAMN05421504_107256 | Not Available | Positive | 6711601 - 6712320 | 25861.9 |
| glycosyl hydrolase family 88 | SAMN05421504_107257 | Not Available | Positive | 6712432 - 6713544 | 39549.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421504_107258 | Not Available | Positive | 6713554 - 6714207 | 23310.7 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421504_107259 | Not Available | Negative | 6714444 - 6714839 | 13981.8 |
| dna polymerase-4 | SAMN05421504_107260 | Not Available | Negative | 6714850 - 6716157 | 46695.0 |
| 4'-phosphopantetheinyl transferase entd (siderophore biosynthesis) | SAMN05421504_107261 | Not Available | Negative | 6716468 - 6717100 | 22982.7 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421504_107262 | Not Available | Negative | 6717100 - 6717939 | 32402.4 |
| surfactin synthase thioesterase subunit | SAMN05421504_107263 | Not Available | Negative | 6717908 - 6718681 | 28055.8 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05421504_107264 | Not Available | Positive | 6718887 - 6720470 | 55113.6 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN05421504_107265 | Not Available | Positive | 6720619 - 6720888 | 9779.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
