Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl diphosphate synthase, type i | SAMN05421504_107246 | Not Available | Positive | 6700713 - 6701741 | 36153.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05421504_107247 | Not Available | Positive | 6701731 - 6702666 | 32715.0 |
| chitinase | SAMN05421504_107248 | Not Available | Negative | 6702692 - 6703744 | 36959.2 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN05421504_107249 | Not Available | Negative | 6704379 - 6705500 | 39361.7 |
| l-aminopeptidase/d-esterase | SAMN05421504_107250 | Not Available | Positive | 6705614 - 6706609 | 33338.7 |
| Trna-cys | Not Available | Not Available | Positive | 6706675 - 6706748 | Not Available |
| sugar lactone lactonase yvre | SAMN05421504_107252 | Not Available | Negative | 6706791 - 6707669 | 30069.2 |
| l-arabinose transport system substrate-binding protein | SAMN05421504_107253 | Not Available | Positive | 6707937 - 6708962 | 35049.6 |
| l-arabinose transport system atp-binding protein | SAMN05421504_107254 | Not Available | Positive | 6709038 - 6710561 | 55035.6 |
| ribose transport system permease protein | SAMN05421504_107255 | Not Available | Positive | 6710558 - 6711598 | 35531.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
