Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | SAMN05421504_107226 | Not Available | Negative | 6678203 - 6679693 | 51492.1 |
| regulatory protein, tetr family | SAMN05421504_107227 | Not Available | Negative | 6679781 - 6680338 | 19621.5 |
| alkaline phosphatase d | SAMN05421504_107228 | Not Available | Negative | 6680458 - 6682026 | 57214.0 |
| hypothetical protein | SAMN05421504_107229 | Not Available | Negative | 6682071 - 6682697 | 20854.3 |
| dna-binding transcriptional activator of the sarp family | SAMN05421504_107230 | Not Available | Positive | 6682955 - 6685846 | 104940.0 |
| hypothetical protein | SAMN05421504_107231 | Not Available | Positive | 6685987 - 6687174 | 41717.6 |
| glucosylceramidase | SAMN05421504_107232 | Not Available | Positive | 6687165 - 6687659 | 17064.0 |
| fad/fmn-containing dehydrogenase | SAMN05421504_107233 | Not Available | Positive | 6687788 - 6689185 | 49799.1 |
| unsaturated chondroitin disaccharide hydrolase | SAMN05421504_107234 | Not Available | Positive | 6689306 - 6690514 | 43647.8 |
| dna-binding transcriptional regulator, frmr family | SAMN05421504_107235 | Not Available | Positive | 6690785 - 6691066 | 10260.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
