Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hygromycin-b 7''-o-kinase | SAMN05421504_107115 | Not Available | Positive | 6546864 - 6547787 | 33353.9 |
| putative zinc-finger | SAMN05421504_107116 | Not Available | Negative | 6547778 - 6548470 | 23933.9 |
| protein of unknown function | SAMN05421504_107117 | Not Available | Negative | 6548467 - 6549360 | 31088.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_107118 | Not Available | Positive | 6549586 - 6550119 | 20318.5 |
| two-component system, lytt family, sensor kinase | SAMN05421504_107119 | Not Available | Negative | 6550222 - 6551412 | 42787.2 |
| na+(or h+)/acetate symporter actp | SAMN05421504_107120 | Not Available | Negative | 6551409 - 6552899 | 51785.2 |
| hypothetical protein | SAMN05421504_107121 | Not Available | Negative | 6552904 - 6553269 | 13628.9 |
| dna-binding response regulator, lytr/algr family | SAMN05421504_107122 | Not Available | Negative | 6553276 - 6554127 | 31316.5 |
| hypothetical protein | SAMN05421504_107123 | Not Available | Negative | 6554145 - 6554363 | 7796.15 |
| amp-binding enzyme | SAMN05421504_107124 | Not Available | Positive | 6554593 - 6555288 | 24487.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
