Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine dehydrogenase (nad+) | SAMN05421504_10765 | Not Available | Negative | 6490436 - 6491503 | 37133.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_10766 | Not Available | Positive | 6491693 - 6492436 | 26071.3 |
| protein of unknown function | SAMN05421504_10767 | Not Available | Positive | 6492510 - 6492917 | 14468.9 |
| selenocysteine lyase/cysteine desulfurase | SAMN05421504_10768 | Not Available | Negative | 6492927 - 6494159 | 44586.8 |
| tryptophan 2,3-dioxygenase | SAMN05421504_10769 | Not Available | Negative | 6494156 - 6494944 | 29721.3 |
| phenylacetic acid degradation operon negative regulatory protein | SAMN05421504_10770 | Not Available | Negative | 6494941 - 6495744 | 30153.2 |
| creatinine amidohydrolase | SAMN05421504_10771 | Not Available | Positive | 6495762 - 6496544 | 27943.9 |
| benzoate-coa ligase family | SAMN05421504_10772 | Not Available | Positive | 6496541 - 6498049 | 54412.7 |
| short-chain dehydrogenase | SAMN05421504_10773 | Not Available | Positive | 6498046 - 6498738 | 23562.0 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421504_10774 | Not Available | Positive | 6498735 - 6499562 | 29336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
