Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05421504_106554 | Not Available | Negative | 6387617 - 6388585 | 32904.2 |
| hypothetical protein | SAMN05421504_106555 | Not Available | Negative | 6388596 - 6389015 | 14249.2 |
| succinyl-diaminopimelate desuccinylase | SAMN05421504_106556 | Not Available | Positive | 6389053 - 6390132 | 38264.4 |
| helix-turn-helix domain-containing protein | SAMN05421504_106557 | Not Available | Negative | 6390165 - 6391409 | 44915.6 |
| aminopeptidase s | SAMN05421504_106558 | Not Available | Negative | 6391426 - 6393021 | 54501.9 |
| zn-dependent metalloprotease | SAMN05421504_106559 | Not Available | Negative | 6393101 - 6395368 | 76971.7 |
| helix-turn-helix domain-containing protein | SAMN05421504_106560 | Not Available | Negative | 6395654 - 6396979 | 48173.5 |
| n-terminal ig-like domain of cellulase | SAMN05421504_106561 | Not Available | Positive | 6397127 - 6398986 | 66174.9 |
| hypothetical protein | SAMN05421504_106562 | Not Available | Positive | 6398997 - 6399824 | 30677.3 |
| hypothetical protein | SAMN05421504_106563 | Not Available | Positive | 6399806 - 6400393 | 20383.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
