Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope-related function transcriptional attenuator common domain-containing protein | SAMN05421504_106524 | Not Available | Negative | 6357979 - 6359532 | 54951.2 |
| dtdp-glucose 4,6-dehydratase | SAMN05421504_106525 | Not Available | Positive | 6359686 - 6360678 | 36259.8 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421504_106526 | Not Available | Positive | 6360701 - 6361570 | 30287.4 |
| hypothetical protein | SAMN05421504_106527 | Not Available | Positive | 6361907 - 6362488 | 20266.7 |
| hypothetical protein | SAMN05421504_106528 | Not Available | Negative | 6362539 - 6362970 | 15342.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_106529 | Not Available | Negative | 6363531 - 6364085 | 20354.1 |
| helix-turn-helix domain-containing protein | SAMN05421504_106530 | Not Available | Negative | 6364167 - 6365150 | 35531.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421504_106531 | Not Available | Negative | 6365298 - 6366383 | 39032.8 |
| glycosyltransferase, gt2 family | SAMN05421504_106532 | Not Available | Negative | 6366376 - 6368889 | 91591.8 |
| glycosyltransferase, gt2 family | SAMN05421504_106533 | Not Available | Negative | 6368920 - 6369732 | 28996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
