Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | SAMN05421504_106284 | Not Available | Positive | 6112755 - 6114371 | 56176.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_106285 | Not Available | Negative | 6114478 - 6115215 | 24484.0 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_106286 | Not Available | Positive | 6115311 - 6115916 | 21885.8 |
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN05421504_106287 | Not Available | Negative | 6115966 - 6116268 | 11065.2 |
| merr hth family regulatory protein | SAMN05421504_106288 | Not Available | Positive | 6116395 - 6117414 | 35958.3 |
| hypothetical protein | SAMN05421504_106289 | Not Available | Positive | 6117424 - 6118254 | 29375.0 |
| two component transcriptional regulator, luxr family | SAMN05421504_106290 | Not Available | Positive | 6118396 - 6118992 | 21243.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_106291 | Not Available | Positive | 6119563 - 6119949 | 13926.8 |
| anti-sigma-d factor rsda to sigma factor binding region | SAMN05421504_106292 | Not Available | Positive | 6119950 - 6120897 | 32492.5 |
| hypothetical protein | SAMN05421504_106293 | Not Available | Negative | 6120972 - 6121367 | 14737.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
