Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l36 | SAMN05421504_106234 | Not Available | Positive | 6060763 - 6060876 | 4417.7 |
| small subunit ribosomal protein s13 | SAMN05421504_106235 | Not Available | Positive | 6061085 - 6061465 | 14353.6 |
| hypothetical protein | SAMN05421504_106236 | Not Available | Positive | 6061462 - 6061647 | 6696.11 |
| ssu ribosomal protein s11p | SAMN05421504_106237 | Not Available | Positive | 6061666 - 6062073 | 14385.3 |
| small subunit ribosomal protein s4 | SAMN05421504_106238 | Not Available | Positive | 6062097 - 6062702 | 23237.2 |
| dna-directed rna polymerase subunit alpha | SAMN05421504_106239 | Not Available | Positive | 6062809 - 6063882 | 38401.4 |
| large subunit ribosomal protein l17 | SAMN05421504_106240 | Not Available | Positive | 6063922 - 6064464 | 19600.4 |
| trna pseudouridine38-40 synthase | SAMN05421504_106241 | Not Available | Positive | 6064465 - 6065355 | 32316.3 |
| hypothetical protein | SAMN05421504_106242 | Not Available | Negative | 6065470 - 6066189 | 25514.3 |
| type vii secretion protein ecce | SAMN05421504_106243 | Not Available | Negative | 6066186 - 6067427 | 43268.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
