Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_101526 | Not Available | Negative | 604049 - 604549 | 18393.1 |
| Trna-pro | Not Available | Not Available | Positive | 604785 - 604858 | Not Available |
| protein of unknown function | SAMN05421504_101528 | Not Available | Positive | 605010 - 605801 | 27897.2 |
| alginate lyase | SAMN05421504_101529 | Not Available | Negative | 605798 - 606970 | 42163.9 |
| pectate lyase superfamily protein | SAMN05421504_101530 | Not Available | Negative | 607085 - 608749 | 60441.3 |
| phenylacetate-coenzyme a ligase paak, adenylate-forming domain family | SAMN05421504_101531 | Not Available | Negative | 608806 - 610158 | 48922.8 |
| rfae bifunctional protein, domain i/rfae bifunctional protein, domain ii | SAMN05421504_101532 | Not Available | Negative | 610176 - 611564 | 48069.9 |
| d-sedoheptulose 7-phosphate isomerase | SAMN05421504_101533 | Not Available | Negative | 611561 - 612124 | 19231.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05421504_101534 | Not Available | Negative | 612121 - 612687 | 19456.0 |
| chitinase | SAMN05421504_101535 | Not Available | Negative | 612875 - 615124 | 78055.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
