Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421504_105717 | Not Available | Negative | 5829427 - 5830776 | 47118.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421504_105718 | Not Available | Positive | 5830916 - 5832364 | 51163.4 |
| dna-binding transcriptional regulator, gntr family | SAMN05421504_105719 | Not Available | Positive | 5832346 - 5833029 | 25653.8 |
| 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | SAMN05421504_105720 | Not Available | Positive | 5833026 - 5834519 | 53555.3 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05421504_105721 | Not Available | Positive | 5834533 - 5835609 | 40616.8 |
| 2-oxo-hept-3-ene-1,7-dioate hydratase | SAMN05421504_105722 | Not Available | Positive | 5835609 - 5836394 | 28080.7 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05421504_105723 | Not Available | Positive | 5836379 - 5837146 | 26244.5 |
| hypothetical protein | SAMN05421504_1061 | Not Available | Negative | 5837627 - 5838421 | 29001.3 |
| protein of unknown function | SAMN05421504_1062 | Not Available | Negative | 5838400 - 5838900 | 17859.3 |
| udp-n-acetylmuramate dehydrogenase | SAMN05421504_1063 | Not Available | Positive | 5838926 - 5839972 | 36563.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
