Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein ytfj (spore_ytfj) | SAMN05421504_101496 | Not Available | Positive | 576835 - 577164 | 11201.6 |
| hypothetical protein | SAMN05421504_101497 | Not Available | Positive | 577203 - 580481 | 121124.0 |
| hypothetical protein | SAMN05421504_101498 | Not Available | Positive | 580549 - 581037 | 16384.7 |
| phosphoinositide phospholipase c, ca2+-dependent | SAMN05421504_101499 | Not Available | Negative | 581022 - 582398 | 48975.3 |
| hypothetical protein | SAMN05421504_101500 | Not Available | Positive | 582681 - 583850 | 43281.8 |
| ca-activated chloride channel family protein | SAMN05421504_101501 | Not Available | Positive | 583847 - 585292 | 51342.7 |
| nudix domain-containing protein | SAMN05421504_101502 | Not Available | Negative | 585295 - 585831 | 20002.9 |
| hypothetical protein | SAMN05421504_101503 | Not Available | Negative | 585860 - 586612 | 25107.8 |
| excreted virulence factor espc, type vii esx diderm | SAMN05421504_101504 | Not Available | Negative | 586609 - 586914 | 10455.1 |
| ybab/ebfc dna-binding family protein | SAMN05421504_101505 | Not Available | Negative | 586911 - 587303 | 13919.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
