Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421504_105567 | Not Available | Negative | 5650172 - 5650789 | 21324.8 |
| hypothetical protein | SAMN05421504_105568 | Not Available | Negative | 5650845 - 5651618 | 27775.9 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN05421504_105569 | Not Available | Positive | 5651727 - 5652668 | 33749.5 |
| chad domain-containing protein | SAMN05421504_105570 | Not Available | Positive | 5652701 - 5654218 | 55924.1 |
| rna polymerase sigma-b factor | SAMN05421504_105571 | Not Available | Negative | 5654571 - 5655344 | 28924.5 |
| serine/threonine-protein kinase rsbw | SAMN05421504_105572 | Not Available | Negative | 5655359 - 5655817 | 16299.3 |
| dna ligase d | SAMN05421504_105573 | Not Available | Positive | 5655922 - 5656872 | 35406.9 |
| dna end-binding protein ku | SAMN05421504_105574 | Not Available | Positive | 5656875 - 5657777 | 33616.3 |
| hypothetical protein | SAMN05421504_105575 | Not Available | Positive | 5657861 - 5658337 | 17180.8 |
| hypothetical protein | SAMN05421504_105576 | Not Available | Negative | 5658446 - 5658772 | 12110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
