Amycolatopsis xylanica strain CPCC 202699

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis xylanica strain CPCC 202699 is a Gram-positive, aerobic bacterium characterized by its non-motile nature. It possesses a single replicon and is capable of sporulation, allowing it to form spores under certain conditions. This strain operates optimally at a temperature of 29°C and falls within the mesophilic temperature range. The presence of flagella has been noted, which is a common feature in some bacterial species, although this strain is non-motile. The ability to form spores is significant for the survival of Amycolatopsis xylanica in fluctuating environmental conditions, allowing it to withstand stressors that might otherwise threaten its viability. The strain’s aerobic requirement suggests a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its characteristics, Amycolatopsis xylanica strain CPCC 202699 may play a role in decomposing organic matter in aerobic environments, contributing to nutrient cycling. Its spore-forming ability could enhance its ecological resilience and facilitate its dissemination in various habitats, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis xylanica
Strainstrain CPCC 202699

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis xylanica strain CPCC 202699 genome assembly, contig:

Gene Summary

Adenine Count

1469318 bp

Thymine Count

1456495 bp

Guanine Count

3232640 bp

Cytosine Count

3247627 bp

Genome Length

9406090 bp

Protein-coding Genes

8489 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma-70 factor, ecf subfamilySAMN05421504_105507Not AvailableNegative5591589 - 559214920461.0
aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit aSAMN05421504_105508Not AvailableNegative5592215 - 559342940910.9
serine/threonine-protein kinase rsbwSAMN05421504_105509Not AvailableNegative5593640 - 559409515931.2
trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthaseSAMN05421504_105510Not AvailableNegative5594071 - 559493132235.0
basic amino acid/polyamine antiporter, apa familySAMN05421504_105511Not AvailableNegative5594921 - 559630647625.3
hypothetical proteinSAMN05421504_105512Not AvailableNegative5596385 - 559687616561.2
two-component system, ompr family, sensor histidine kinase mtrbSAMN05421504_105513Not AvailableNegative5596873 - 559828550710.4
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN05421504_105514Not AvailableNegative5598282 - 559898025534.7
pap2 superfamily proteinSAMN05421504_105515Not AvailablePositive5599083 - 559994329592.6
dna-binding transcriptional regulator, fadr familySAMN05421504_105516Not AvailableNegative5600039 - 560074625597.5

Displaying genes 5121 – 5130 of 8572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.