Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421504_105457 | Not Available | Negative | 5529449 - 5530750 | 45543.6 |
| purine-cytosine permease | SAMN05421504_105458 | Not Available | Negative | 5530800 - 5532263 | 51530.4 |
| helix-turn-helix domain-containing protein | SAMN05421504_105459 | Not Available | Positive | 5532523 - 5533518 | 35511.4 |
| hypothetical protein | SAMN05421504_105460 | Not Available | Negative | 5533500 - 5534351 | 30270.8 |
| hypothetical protein | SAMN05421504_105461 | Not Available | Positive | 5534563 - 5534919 | 12731.7 |
| peptidase_c39 like family protein | SAMN05421504_105462 | Not Available | Positive | 5534949 - 5535599 | 23512.9 |
| nb-arc domain-containing protein | SAMN05421504_105463 | Not Available | Positive | 5535710 - 5537683 | 72983.9 |
| hypothetical protein | SAMN05421504_105464 | Not Available | Negative | 5537664 - 5539241 | 56768.0 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421504_105465 | Not Available | Negative | 5539333 - 5540310 | 35558.4 |
| lysophospholipase l1 | SAMN05421504_105466 | Not Available | Positive | 5540383 - 5541627 | 43036.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
