Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis protein | SAMN05421504_105396 | Not Available | Negative | 5453602 - 5455584 | 71437.6 |
| snapalysin | SAMN05421504_105397 | Not Available | Positive | 5455747 - 5456268 | 17933.3 |
| histidine kinase | SAMN05421504_105398 | Not Available | Positive | 5456320 - 5457537 | 43135.8 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421504_105399 | Not Available | Positive | 5457531 - 5458187 | 23061.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421504_105400 | Not Available | Negative | 5458171 - 5459877 | 60658.8 |
| lycopene beta-cyclase | SAMN05421504_105401 | Not Available | Negative | 5459951 - 5461036 | 38293.4 |
| dgtpase | SAMN05421504_105402 | Not Available | Positive | 5461085 - 5462650 | 56550.6 |
| proprotein convertase p-domain-containing protein | SAMN05421504_105403 | Not Available | Positive | 5462809 - 5465745 | 99369.1 |
| hypothetical protein | SAMN05421504_105404 | Not Available | Positive | 5465803 - 5466426 | 22452.0 |
| hypothetical protein | SAMN05421504_105405 | Not Available | Positive | 5466477 - 5466869 | 13622.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
