Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN05421504_105276 | Not Available | Positive | 5322365 - 5323003 | 21339.3 |
| chorismate synthase | SAMN05421504_105277 | Not Available | Positive | 5323081 - 5324268 | 41911.0 |
| shikimate kinase | SAMN05421504_105278 | Not Available | Positive | 5324265 - 5324792 | 18240.8 |
| 3-dehydroquinate synthase | SAMN05421504_105279 | Not Available | Positive | 5324789 - 5325895 | 38560.8 |
| 3-dehydroquinate dehydratase | SAMN05421504_105280 | Not Available | Positive | 5325892 - 5326326 | 15497.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421504_105281 | Not Available | Positive | 5326323 - 5327390 | 38085.4 |
| hypothetical protein | SAMN05421504_105282 | Not Available | Positive | 5327452 - 5328912 | 50376.4 |
| hypothetical protein | SAMN05421504_105283 | Not Available | Negative | 5328932 - 5329372 | 14474.7 |
| xaa-pro aminopeptidase | SAMN05421504_105284 | Not Available | Positive | 5329439 - 5330605 | 41381.0 |
| elongation factor p | SAMN05421504_105285 | Not Available | Positive | 5330640 - 5331203 | 20556.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
