Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0755 protein | SAMN05421504_105256 | Not Available | Positive | 5306970 - 5308430 | 52567.0 |
| shikimate dehydrogenase | SAMN05421504_105257 | Not Available | Positive | 5308402 - 5309277 | 29844.8 |
| hypothetical protein | SAMN05421504_105258 | Not Available | Negative | 5309178 - 5309504 | 11811.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_105259 | Not Available | Negative | 5309871 - 5310545 | 25339.5 |
| hypothetical protein | SAMN05421504_105260 | Not Available | Negative | 5310561 - 5310974 | 14889.7 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421504_105261 | Not Available | Positive | 5311127 - 5312320 | 43522.1 |
| phosphoglycerate dehydrogenase | SAMN05421504_105262 | Not Available | Positive | 5312338 - 5313279 | 33970.8 |
| regulatory protein, luxr family | SAMN05421504_105263 | Not Available | Positive | 5313482 - 5313757 | 9968.17 |
| hypothetical protein | SAMN05421504_105264 | Not Available | Negative | 5314075 - 5314446 | 13558.9 |
| tap-like protein | SAMN05421504_105265 | Not Available | Negative | 5314548 - 5315936 | 49113.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
