Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421504_105226 | Not Available | Negative | 5271465 - 5271920 | 16539.8 |
| probable f420-dependent oxidoreductase, rv2161c family | SAMN05421504_105227 | Not Available | Positive | 5272014 - 5272832 | 29630.2 |
| cytidine and deoxycytidylate deaminase zinc-binding region | SAMN05421504_105228 | Not Available | Positive | 5272829 - 5273239 | 14432.1 |
| d-amino-acid oxidase | SAMN05421504_105229 | Not Available | Positive | 5273259 - 5274140 | 30361.7 |
| geranylgeranyl diphosphate synthase, type i | SAMN05421504_105230 | Not Available | Positive | 5274279 - 5275361 | 38133.2 |
| uncharacterized conserved protein, duf2252 family | SAMN05421504_105231 | Not Available | Negative | 5275358 - 5276704 | 48731.3 |
| ornithine--oxo-acid transaminase | SAMN05421504_105232 | Not Available | Negative | 5276754 - 5277977 | 42570.9 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN05421504_105233 | Not Available | Positive | 5278151 - 5278963 | 30731.9 |
| dipeptidyl-peptidase-4 | SAMN05421504_105234 | Not Available | Positive | 5278985 - 5281084 | 75354.6 |
| probable f420-dependent oxidoreductase, rv3093c family | SAMN05421504_105235 | Not Available | Positive | 5281081 - 5282034 | 34035.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
