Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | SAMN05421504_105186 | Not Available | Negative | 5229890 - 5231113 | 44333.0 |
| two component transcriptional regulator, luxr family | SAMN05421504_105187 | Not Available | Negative | 5231214 - 5231741 | 18264.9 |
| protein of unknown function | SAMN05421504_105188 | Not Available | Negative | 5233018 - 5233572 | 19885.5 |
| uroporphyrinogen decarboxylase | SAMN05421504_105189 | Not Available | Positive | 5233667 - 5234716 | 37252.0 |
| oxygen-dependent protoporphyrinogen oxidase | SAMN05421504_105190 | Not Available | Positive | 5234713 - 5236092 | 46917.6 |
| chlorite dismutase | SAMN05421504_105191 | Not Available | Positive | 5236089 - 5236790 | 26701.5 |
| coa-transferase family iii | SAMN05421504_105192 | Not Available | Positive | 5236790 - 5238073 | 44905.7 |
| hypothetical protein | SAMN05421504_105193 | Not Available | Negative | 5238044 - 5238394 | 13247.1 |
| hypothetical protein | SAMN05421504_105194 | Not Available | Negative | 5238391 - 5239194 | 29002.7 |
| tigr04222 domain-containing protein | SAMN05421504_105195 | Not Available | Negative | 5239187 - 5240074 | 30345.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
