Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421504_105156 | Not Available | Positive | 5189624 - 5190328 | 25883.7 |
| trk system potassium uptake protein trka | SAMN05421504_105157 | Not Available | Negative | 5190424 - 5191080 | 23540.2 |
| trk system potassium uptake protein trka | SAMN05421504_105158 | Not Available | Negative | 5191080 - 5191745 | 23621.1 |
| amino acid transporter | SAMN05421504_105159 | Not Available | Positive | 5191847 - 5193880 | 73850.8 |
| trna/tmrna/rrna uracil-c5-methylase, trma/rlmc/rlmd family | SAMN05421504_105160 | Not Available | Positive | 5193877 - 5195070 | 42667.5 |
| s-adenosyl methyltransferase | SAMN05421504_105161 | Not Available | Negative | 5195113 - 5195925 | 29764.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05421504_105162 | Not Available | Positive | 5196048 - 5196800 | 25974.2 |
| choline dehydrogenase | SAMN05421504_105163 | Not Available | Negative | 5196852 - 5198396 | 56015.9 |
| permease, urea carboxylase system | SAMN05421504_105164 | Not Available | Negative | 5198389 - 5199888 | 53853.6 |
| betaine-aldehyde dehydrogenase | SAMN05421504_105165 | Not Available | Negative | 5199903 - 5201381 | 52478.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
