Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421504_10526 | Not Available | Positive | 5041472 - 5042092 | 22488.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_10527 | Not Available | Negative | 5042576 - 5043391 | 28793.0 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421504_10528 | Not Available | Positive | 5043514 - 5044296 | 28001.3 |
| intein c-terminal splicing region/intein n-terminal splicing region | SAMN05421504_10529 | Not Available | Positive | 5044567 - 5048607 | 138832.0 |
| hypothetical protein | SAMN05421504_10530 | Not Available | Positive | 5048613 - 5048978 | 13091.2 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_10531 | Not Available | Negative | 5049028 - 5049672 | 23653.6 |
| acyl-coa dehydrogenase | SAMN05421504_10532 | Not Available | Positive | 5049817 - 5051832 | 70391.0 |
| superfamily ii dna or rna helicase, snf2 family | SAMN05421504_10533 | Not Available | Positive | 5051874 - 5054534 | 96398.0 |
| acetyl esterase/lipase | SAMN05421504_10534 | Not Available | Negative | 5054597 - 5055829 | 44420.3 |
| acyltransferase, ws/dgat/mgat | SAMN05421504_10535 | Not Available | Positive | 5055990 - 5057387 | 50231.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
