Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05421504_104749 | Not Available | Positive | 4944542 - 4945435 | 31011.9 |
| secretory lipase | SAMN05421504_104750 | Not Available | Negative | 4945474 - 4946787 | 45732.6 |
| fatty-acyl-coa synthase | SAMN05421504_104751 | Not Available | Negative | 4946784 - 4948361 | 56176.6 |
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN05421504_104752 | Not Available | Positive | 4948506 - 4949285 | 26944.3 |
| hypothetical protein | SAMN05421504_104753 | Not Available | Positive | 4949296 - 4949667 | 12711.4 |
| hypothetical protein | SAMN05421504_104754 | Not Available | Positive | 4949938 - 4950357 | 15590.7 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421504_104755 | Not Available | Positive | 4950460 - 4951551 | 38162.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05421504_104756 | Not Available | Positive | 4951616 - 4952629 | 36630.4 |
| nitt/taut family transport system atp-binding protein | SAMN05421504_104757 | Not Available | Positive | 4952626 - 4953375 | 27277.7 |
| nitt/taut family transport system permease protein | SAMN05421504_104758 | Not Available | Positive | 4953375 - 4954208 | 29785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
