Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421504_104588 | Not Available | Negative | 4766733 - 4767809 | 38577.4 |
| hypothetical protein | SAMN05421504_104589 | Not Available | Positive | 4767908 - 4768696 | 27301.0 |
| signal transduction histidine kinase | SAMN05421504_104590 | Not Available | Negative | 4768742 - 4769749 | 36136.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421504_104591 | Not Available | Negative | 4769746 - 4770426 | 24814.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_104592 | Not Available | Positive | 4770578 - 4771537 | 34884.6 |
| hypothetical protein | SAMN05421504_104593 | Not Available | Negative | 4771586 - 4771723 | 5585.64 |
| hypothetical protein | SAMN05421504_104594 | Not Available | Negative | 4771940 - 4772149 | 7570.85 |
| hypothetical protein | SAMN05421504_104595 | Not Available | Positive | 4772305 - 4772532 | 8307.9 |
| hypothetical protein | SAMN05421504_104596 | Not Available | Positive | 4772517 - 4773041 | 20010.8 |
| helix-turn-helix domain-containing protein | SAMN05421504_104597 | Not Available | Positive | 4773038 - 4773865 | 30485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
