Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone reductase | SAMN05421504_101416 | Not Available | Negative | 486094 - 487011 | 30717.4 |
| methyltransferase domain-containing protein | SAMN05421504_101417 | Not Available | Negative | 487070 - 487846 | 28393.9 |
| npcbm-associated, new3 domain of alpha-galactosidase | SAMN05421504_101418 | Not Available | Negative | 487903 - 490470 | 91067.8 |
| rhamnulokinase | SAMN05421504_101419 | Not Available | Negative | 490599 - 491921 | 47191.2 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN05421504_101420 | Not Available | Negative | 491918 - 493921 | 70353.2 |
| l-rhamnose isomerase / sugar isomerase | SAMN05421504_101421 | Not Available | Negative | 493918 - 495066 | 42120.5 |
| laci family transcriptional regulator | SAMN05421504_101422 | Not Available | Positive | 495147 - 496115 | 34153.0 |
| helix-turn-helix domain-containing protein | SAMN05421504_101423 | Not Available | Negative | 496164 - 497291 | 40489.8 |
| subtilisin inhibitor-like | SAMN05421504_101424 | Not Available | Positive | 497462 - 497872 | 14313.1 |
| hypothetical protein | SAMN05421504_101425 | Not Available | Positive | 498088 - 498354 | 9399.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
