Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excreted virulence factor espc, type vii esx diderm | SAMN05421504_103646 | Not Available | Negative | 3698949 - 3699266 | 11070.1 |
| ybab/ebfc dna-binding family protein | SAMN05421504_103647 | Not Available | Negative | 3699269 - 3699799 | 19183.3 |
| 2-oxoglutarate decarboxylase | SAMN05421504_103648 | Not Available | Positive | 3700037 - 3703744 | 135163.0 |
| hypothetical protein | SAMN05421504_103649 | Not Available | Negative | 3703811 - 3704416 | 20605.3 |
| protein of unknown function | SAMN05421504_103650 | Not Available | Negative | 3704463 - 3705185 | 24922.4 |
| hypothetical protein | SAMN05421504_103651 | Not Available | Negative | 3705232 - 3705864 | 22034.2 |
| serine protease, subtilisin family | SAMN05421504_103652 | Not Available | Negative | 3705876 - 3707420 | 52183.6 |
| putative acetyltransferase | SAMN05421504_103653 | Not Available | Positive | 3707778 - 3708281 | 17642.0 |
| osmoprotectant transport system substrate-binding protein | SAMN05421504_103654 | Not Available | Negative | 3708278 - 3709156 | 31330.5 |
| osmoprotectant transport system permease protein | SAMN05421504_103655 | Not Available | Negative | 3709153 - 3709836 | 23346.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
