Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, gntr family | SAMN05421504_103586 | Not Available | Positive | 3625766 - 3626437 | 24223.1 |
| protein of unknown function | SAMN05421504_103587 | Not Available | Negative | 3626487 - 3626951 | 17595.8 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05421504_103588 | Not Available | Negative | 3627591 - 3628643 | 36593.7 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05421504_103589 | Not Available | Negative | 3628640 - 3630097 | 51178.5 |
| 4-aminobutyrate aminotransferase | SAMN05421504_103590 | Not Available | Positive | 3630194 - 3631432 | 43481.9 |
| hypothetical protein | SAMN05421504_103591 | Not Available | Positive | 3631526 - 3633142 | 58536.0 |
| probable f420-dependent oxidoreductase, msmeg_2516 family | SAMN05421504_103592 | Not Available | Positive | 3633139 - 3634056 | 33544.8 |
| hypothetical protein | SAMN05421504_103593 | Not Available | Positive | 3634211 - 3634858 | 23057.3 |
| hypothetical protein | SAMN05421504_103594 | Not Available | Positive | 3634855 - 3635439 | 21641.9 |
| hypothetical protein | SAMN05421504_103595 | Not Available | Positive | 3635436 - 3636701 | 46712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
