Amycolatopsis xylanica strain CPCC 202699

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis xylanica strain CPCC 202699 is a Gram-positive, aerobic bacterium characterized by its non-motile nature. It possesses a single replicon and is capable of sporulation, allowing it to form spores under certain conditions. This strain operates optimally at a temperature of 29°C and falls within the mesophilic temperature range. The presence of flagella has been noted, which is a common feature in some bacterial species, although this strain is non-motile. The ability to form spores is significant for the survival of Amycolatopsis xylanica in fluctuating environmental conditions, allowing it to withstand stressors that might otherwise threaten its viability. The strain’s aerobic requirement suggests a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its characteristics, Amycolatopsis xylanica strain CPCC 202699 may play a role in decomposing organic matter in aerobic environments, contributing to nutrient cycling. Its spore-forming ability could enhance its ecological resilience and facilitate its dissemination in various habitats, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis xylanica
Strainstrain CPCC 202699

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis xylanica strain CPCC 202699 genome assembly, contig:

Gene Summary

Adenine Count

1469318 bp

Thymine Count

1456495 bp

Guanine Count

3232640 bp

Cytosine Count

3247627 bp

Genome Length

9406090 bp

Protein-coding Genes

8489 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucose 4-epimeraseSAMN05421504_103506Not AvailableNegative3540518 - 354149235069.6
udp-n-acetyl-d-mannosaminuronic acid dehydrogenaseSAMN05421504_103507Not AvailableNegative3541489 - 354283547326.9
dtdp-3-amino-3,6-dideoxy-alpha-d-glucopyranose n,n-dimethyltransferase/dtdp-3-amino-3,4, 6-trideoxy-alpha-d-glucopyranose n,n-dimethyltransferaseSAMN05421504_103508Not AvailableNegative3542919 - 354366827472.5
dtdp-4-amino-4,6-dideoxyglucoseSAMN05421504_103509Not AvailablePositive3543729 - 354493442977.4
dtdp-4-amino-4,6-dideoxy-d-glucose ammonia-lyaseSAMN05421504_103510Not AvailablePositive3544931 - 354633151620.6
radical sam superfamily enzyme ygiq, upf0313 familySAMN05421504_103511Not AvailableNegative3546615 - 354852872392.9
dtdp-3-amino-3,6-dideoxy-alpha-d-glucopyranose n,n-dimethyltransferase/dtdp-3-amino-3,4, 6-trideoxy-alpha-d-glucopyranose n,n-dimethyltransferaseSAMN05421504_103512Not AvailablePositive3548737 - 354945025921.6
asparagine synthase (glutamine-hydrolysing)SAMN05421504_103513Not AvailablePositive3549464 - 355130268784.6
drug resistance transporter, emrb/qaca subfamilySAMN05421504_103514Not AvailablePositive3551299 - 355272348772.8
predicted dithiol-disulfide oxidoreductase, duf899 familySAMN05421504_103515Not AvailablePositive3552720 - 355342726621.5

Displaying genes 3261 – 3270 of 8572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.