Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN05421504_103506 | Not Available | Negative | 3540518 - 3541492 | 35069.6 |
| udp-n-acetyl-d-mannosaminuronic acid dehydrogenase | SAMN05421504_103507 | Not Available | Negative | 3541489 - 3542835 | 47326.9 |
| dtdp-3-amino-3,6-dideoxy-alpha-d-glucopyranose n,n-dimethyltransferase/dtdp-3-amino-3,4, 6-trideoxy-alpha-d-glucopyranose n,n-dimethyltransferase | SAMN05421504_103508 | Not Available | Negative | 3542919 - 3543668 | 27472.5 |
| dtdp-4-amino-4,6-dideoxyglucose | SAMN05421504_103509 | Not Available | Positive | 3543729 - 3544934 | 42977.4 |
| dtdp-4-amino-4,6-dideoxy-d-glucose ammonia-lyase | SAMN05421504_103510 | Not Available | Positive | 3544931 - 3546331 | 51620.6 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05421504_103511 | Not Available | Negative | 3546615 - 3548528 | 72392.9 |
| dtdp-3-amino-3,6-dideoxy-alpha-d-glucopyranose n,n-dimethyltransferase/dtdp-3-amino-3,4, 6-trideoxy-alpha-d-glucopyranose n,n-dimethyltransferase | SAMN05421504_103512 | Not Available | Positive | 3548737 - 3549450 | 25921.6 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421504_103513 | Not Available | Positive | 3549464 - 3551302 | 68784.6 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421504_103514 | Not Available | Positive | 3551299 - 3552723 | 48772.8 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN05421504_103515 | Not Available | Positive | 3552720 - 3553427 | 26621.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
